Results

Scientific publications
  1. A. Cristea - Numerical effects in a finite difference lattice Boltzmann model for liquid – vapour systems

    International Journal of Modern Physics C, 17(8), 1191-1201 (2006)

  2. Dana Petcu, Daniel Vizman, Marcin Paprzycki - Porting CFD Codes Towards Grids: A Case Study

    in: Wyrzykowski, R., Dongarra, J., Meyer, N., Wasniewski, J. (eds) Parallel Processing and Applied Mathematics. PPAM 2005. Lecture Notes in Computer Science, vol 3911. Springer, Berlin, Heidelberg (2006). https://doi.org/10.1007/11752578_98

  3. T. A. Beu - Simulations of biological ion channels by molecular dynamics

    Journal of Optoelectronics and Advanced Materials, 8, 160-163 (2006)

  4. C. Stelian, D. Vizman - Numerical modeling of frequency influence on the electromagnetic stirring of semiconductor melts

    Crystal Research and Technology 41, 645-652 (2006)

  5. Adrian Neagu, Ioan Kosztin, Karoly Jakab, Bogdan Barz, Monica Neagu, Richard Jamison, Gabor Forgacs - Computational modeling of tissue self-assembly

    Modern Physics Letters B 20, 1217-1231 (2006)

  6. Karoly Jakab, Brook Damon, Adrian Neagu, Anatolij Kachurin, Gabor Forgacs - Three-dimensional tissue constructs built by bioprinting

    Biorheology43, 509-513 (2006)

  7. A. Cristea - Numerical schemes for lattice Boltzmann models

    Romanian Reports in Physics 58, 319-324 (2006)

  8. V. Sofonea - Lattice Boltzmann approach to thermal transpiration

    Physical Review E 74, 056705-1:5 (2006)

  9. V. Sofonea - Finite difference lattice Boltzmann approach to pressure driven microchannel flow with variable temperature

    Europhysics Letters 76, 829-835 (2006)

  10. D. Vizman, J. Friedrich, G. Mueller - 3D time-dependent numerical study of the influence of the melt flow on the interface shape in a silicon ingot casting process

    Journal of Crystal Growth 303, 231-235 (2007)

  11. T. A. Beu, Ana-Maria Florescu - Revised Equilibrium Structures of Small Water Clusters

    Studia Universitatis Babes-Bolyai, Physica, LI (1), 3 (2006)

  12. T. A. Beu, Ana-Maria Florescu - Infrared Spectrum Calculations for Small Water Clusters

    Studia Universitatis Babes-Bolyai, Physica, LI (1), 79 (2006)

  13. D. Petcu - Towards Automated Creation of Clients for Grid Services Wrapping CFD Codes

    WSEAS Transactions on Computers 3 (6), 573-580 (2007)

  14. D.Petcu, D. Zaharie, H. Popa, M. Frincu, A. Eckstein - Grid services based un heuristic methods for multi-objective optimization problems

    Proceedings CSCS-16: 16th International Conference on Control Systems and Computer Science, May 22-25, 2007, Politehnica University of Bucharest, Editura Politehnica (2007)

  15. Francoise Marga, Adrian Neagu, Ioan Kosztin, Gabor Forgacs - Developmental biology and tissue engineering

    Birth Defects Research C-Embryo Today-Reviews, 81, 320-328(2007)

  16. Octavian Doaga, Tudor Savopol, Adrian Neagu, Eugenia Kovács - Study about cell adhesion kinetics on solid biomatrices

    Romanian Journal Of Biophysics, 17(3), 177-183 (2007)

  17. Victor Sofonea – Discontinous Galerkin schemes for isothermal lattice Boltzmann models in one dimension

    International Journal of Modern Physics C19 (5), 677-688 (2008)

  18. C. Stelian - Numerical modeling of radiative heat transfer in Bridgman solidification of semi-transparent BaF2 crystals

    Journal of Crystal Growth 306, 444-451 (2007)

  19. C. Stelian - Oscillations of the longitudinal solutal profile in Bridgman growth of doped crystals

    Journal of Crystal Growth 310, 1482-1486 (2008)

  20. D. Petcu, A. Eckstein, C. Giurgiu - Adapting a legacy code for ordinary differential equation to novel software and hardware architectures

    WSEAS TRANSACTIONS on COMPUTERS 7(5), 463-472 (2008)

  21. D. Petcu - Teaching Grid Technologies to PhD Students, Part 2: Course Structure and Experiences

    IEEE Distributed Systems Online, 9(4) (2008)

  22. St. Maruster, C. Popirlan - On the Mann type iteration and convex feasibility problem

    Journal of Computational and Applied Mathematic 212, 390-396 (2008)

  23. I. Turcu, R. Bratfalean - Narrowly peaked forward light scattering on particulate media I. Assessment of the multiple scattering contributions to the effective phase function

    Journal of Optics A: Pure and Applied Optics 10 (1) 015002 (8pp) (2007)

  24. I. Turcu, R. Bratfalean and Silvia Neamtu - Narrowly peaked forward light scattering on particulate media II. Angular spreading of light scattered by polystyrene microspheres

    Journal of Optics A: Pure and Applied Optics10 (7) 075007 (7pp) (2008)

  25. Octavian Doaga, Tudor Savopol, Monica Neagu, Adrian Neagu, Eugenia Kovacs - The kinetics of cell adhesion to solid scaffolds: an experimental and theoretical approach

    Journal of Biological Physics 34, 495–509, (2008)

  26. D. Vizman, V. Sofonea, A. Cristea - Metode numerice avansate si aplicatii

    Editura Eurobit, Timisoara, 2008, 185 pag.

Conferences
  1. Adrian Neagu, Monica Neagu - Computer Simulations of Biological Self-Organization

    Physics Conference TIM-05, Timisoara, Romania, 25-26 November 2005, oral presentation

  2. T. A. Beu - Simulations of Biological Ion Channels

    Several Aspects of Biology, Chemistry, Informatics, Mathematics, and Physics – International Conference, University of Oradea, Romania, 11-13 November 2005

  3. T. A. Beu - Simulation of the Ion Transport through Biological Membrane Channels

    Physics Conference TIM-05, Timisoara, Romania, 25-26 November 2005, plenary presentation

  4. A. Cristea - High order numerical schemes for finite difference lattice Boltzmann models

    Transnational Access Meeting (TAM 2005) HPC-EUROPA, Stuttgart, Germany, 20 – 25 September 2005

  5. A. Cristea – Efecte numerice pentru scheme de ordin superior in cadrul modelelor Lattice Boltzmann

    Physics Conference TIM-05, Timisoara, Romania, 25-26 November 2005, oral presentation

  6. V. Sofonea – Modele Lattice Boltzmann pentru studiul curgerii fluidelor in micro-canale

    Physics Conference TIM-05, Timisoara, Romania, 25-26 November 2005, oral presentation

  7. D. Vizman – Some aspects of melt flow in industrial crystal growth processes

    Physics Conference TIM-05, Timisoara, Romania, 25-26 November 2005, oral presentation

  8. D. Vizman, V. Sofonea, T. Beu, A. Neagu - Simularea numerica a proceselor de transport si structurare la scara micro/nanometrica in biomedicina si stiinta materialelor

    Al 5-lea seminar national de nanostiinta si nanotehnologie, organizat in colaborare de Academia Romana si CNCSIS,Bucharest, Romania, March 2nd, 2006, oral presentation

  9. V. Sofonea - Lattice Boltzmann approach to micro-scale flow

    3-rd Microfluidics Conference, Toulouse, France

  10. Stefan Maruster - On the Mann iteration and convex feasibility problem

    12th International Congress on Computational and Applied Mathematics (ICAM) Katholieke Universiteit Leuven, Leuven, Belgium, 10-14 July 2006

  11. Dana Petcu - Building a Portal for Grid-based Services

    The 7th International Conference on Technical Informatics CONTI 2006, Timisoara, Romania, 8 - 9 June 2006

  12. Cristian V. L. Pop, Ioan Turcu, Silvia Neamtu - Angular dependence of light scattered at small angle by biological cells in suspension

    The Third Conference on Laser Optics for Young Scientists (LOYS 2006), St. Petersburg, Russia, June 26-30, 2006

  13. Adrian Neagu, Vladimir Mironov, Monica Neagu, Roger R. Markwald, Gabor Forgacs - Mathematical Modeling and Computer Simulations of Endothelial-Mesenchymal Transformation

    Advances in Innovative Technologies and Tissue Engineering for the Treatment of Heart Valve Diseases, Hilton Head Island, South Carolina, USA, 2-5 March 2006, oral presentation

  14. Brooke Damon, Vladimir Mironov, Adrian Neagu, Monica Neagu, Roger R. Markwald, Gabor Forgacs - An In Vitro Model for the Study of Valvulogenesis

    Advances in Innovative Technologies and Tissue Engineering for the Treatment of Heart Valve Diseases, Hilton Head Island, South Carolina, USA, 2-5 March 2006, poster presentation

  15. Adrian Neagu, Monica Neagu, Vladimir Mironov, Ioan Kosztin, Gabor Forgacs - Computational Tissue Engineering

    Regenerate World Congress On Tissue Engineering and Regenerative Medicine, Pittsburgh, Pennsylvania, USA, 25 – 27 aprilie 2006, poster presentation

  16. Karoly Jakab, Adrian Neagu, Brook Damon, Vladimir Mironov, Roger R. Markwald, Colin Weston, Gabor Forgacs - Biological Self Organization In Engineering Functional 3D Tissue Constructs By Bioprinting

    Regenerate World Congress On Tissue Engineering and Regenerative Medicine, Pittsburgh, Pennsylvania, USA, 25 – 27 aprilie 2006, poster presentation

  17. D. Petcu - Automatic Generated Clients of Grid Services for Computational Fluid Dynamics

    Procs. MATH'06, 10th WSEAS International Conference on Applied Mathematics, Procs. MATH'06, 10th WSEAS International Conference on Applied Mathematics, November 1-3, 2006, Dallas, Texas, USA

  18. D. Petcu - Mathematics on the net: state-of-the-art and challenges

    8th French-Romanian Colloquium on Applied Mathematics, Chambery, France, 28-31 August 2006, invited talk

  19. T. A. Beu - Efficient electrolyte modeling in MD simulations of transport in membrane channels

    XX Sitges Conference, Physical Biology: from Molecular Interactions to Cellular Behavior, Sitges, Barcelona, Spain, 5-9 June 2006, poster presentation

  20. T. A. Beu - Calculations of Structure and IR Frequency Shifts for Water and Ammonia Clusters

    7th International Balkan Workshop on Applied Physics (IBWAP), Constanta, Romania, July 5-7, 2006 (invited talk)

  21. A.-M. Florescu, T. A. Beu - Vibrational Frequency Shifts for (H2O)N Clusters, N = 20

    7th International Balkan Workshop on Applied Physics (IBWAP), Constanta, Romania, July 5-7, 2006 (poster presentation)

  22. Adrian Neagu - Directed self-assembly of living cells,

    International Workshop on Cell and Tissue Engineering, Belgrade, Serbia, July 1-2, 2006 (invited talk)

  23. Adrian Neagu - Computational modeling of tissue self-assembly Invited Lecture,

    Summer School on Cell and Tissue Engineering, Faculty of Technology and Metallurgy, Belgrade, Serbia, July 3-8, 2006 (invited lecture)

  24. Teodor Contras - Numerical Simulation of Melt Flow in industrial Czochralski-like Configurations

    4th International Student Conference of the Balkan Physical Union, Bodrum, Turkey, 29 Aug. - 1 Sept 2006 (oral presentation)

  25. Daniel Vizman, Masahito Watanabe, Jochen Friedrich, Georg Mueller - Influence of different types of Magnetic fields on the interface shape in a 200 mm Si-EMCZ configuration

    5th International Workshop on Modelling in Crystal Growth, Bamberg, Germany, September 10-13, 2006 (oral presentation)

  26. Daniel Vizman, Jochen Friedrich, Georg Mueller - Numerical Simulation of Melt Flow in directional solidification of photovoltaic silicon ingot

    5th International Workshop on Modelling in Crystal Growth, Bamberg, Germany, September 10-13, 2006 (poster presentation)

  27. V. Sofonea, A. Cristea - Lattice Boltzmann approach to flow phenomena at the micro/nanoscale,

    COST Workshop on Magnetic nanofluids and composites: Synthesis, properties and applications, Timisoara, Romania, 22 – 25 Iulie, 2006 (oral presentation)

  28. V. Sofonea, A. Cristea - Lattice Boltzmann approach to micro-flows with variable temperature

    15-th International Conference "Discrete Simulation in Fluid Dynamics (DSFD 2006)", Geneva, Switzerland, 21 – 25 August, (oral presentation)

  29. A. Cristea, V. Sofonea, A. Onisan - Aparent values of transport coefficients in a thermal Lattice Boltzmann model

    15-th International Conference "Discrete Simulation in Fluid Dynamics (DSFD 2006)", Geneva, Switzerland, 21 – 25 August, (oral presentation)

  30. O. Doaga - Home-made experimental design for evaluating the cell seeding on 3D scaffolds

    International Conference TERMIS-EU, Rotterdam, Netherlands, October 8 - 12, 2006 (oral presentation)

  31. Daniel Vizman - 3D modeling of thermal convection in industrial Czochralski-like configurations

    Multiphysics Conference 2006, Maribor, Slovenia, 14-15 December 2006 (oral presentation)

  32. I. Turcu - Size distribution in particulate media obtained from small angle static light scattering experiments

    IX-th National Conference of Biophysics, Bucharest, Romania, 11-14 May 2007

  33. Silvia Neamtu, R. Bratfalean, I.Turcu - Salt induced latex aggregation characterized by quasi-ballistic light scattering technique

    IX-th National Conference of Biophysics, 11-14 May 2007

  34. T. A.Beu - Efficient water modeling in computer simulations (from clusters to ion channels),

    University Paul Sabatier Toulouse III, Toulouse, France, May 2 2007 (invited talk)

  35. O. Doaga - Cell adhesion kinetics on solid biomatrices

    Romanian Society of Pure and Applied Biophysics National Conference Bucharest, Romania, May 11-13 2007 (oral presentation)

  36. Adrian Neagu, Ioan Kosztin, Vladimir Mironov, Bogdan Barz, Monica Neagu, Roger R. Markwald, Gabor Forgacs - Computational modeling of epithelial-mesenchymal transformations

    142-Plat. la Platform P: Cell Mechanics & Motility (oral presentation)

  37. Alexander R. Small, Adrian Neagu, Franck Amyot, Dan Sackett, Victor Chernomordik, Amir Gandjbakhche - Which form of VEGF can guide endothelial cell migration?

    (Poster, 3083-Pos/B446)

  38. Elijah Flenner, Bogdan Barz, Lorant Janosi, Adrian Neagu, Ioan Kosztin - Monte Carlo and particle dynamics simulations of cellular aggregates: a comparative study

    (Poster 714-Pos./B558)

  39. Cyrille Norotte, Adrian Neagu, Francoise Marga, Diego Saenz, Gabor Forgacs, Ioan Kosztin - A Novel Way of Evaluating the Effective Surface Tension of Living Tissues: Biological Implications

    (Poster 1567-Pos/B620)

  40. Bogdan Barz, Josh Hammel, Diego Saenz, Cyrille Norotte, Francoise Marga, Adrian Neagu, Ioan Kosztin, Gabor Forgacs - In vitro and in silico design of branched tubular structures from cellular aggregates

    (Poster 2322-Pos/B538)

  41. T. A. Beu - MD simulations of bulk liquids, interfaces and ion channels

    MOLMOD - Molecular Modeling in Chemistry and Biochemistry, 5-8 July 2007, Arcalia, Romania (invited talk)

  42. T.A. Beu - Efficient electrolyte modeling in MD simulations of bulk liquids, interfaces and ion channels

    CCP2007- Conference on Computational PhysicsSeptember 5-8 2007, Brussels, Belgium (poster presentation)

  43. Ioan Turcu - Effective Phase Function of Light Scattered at Small Angles by Polydisperse Particulate Media

    The 15th International Conference on Advanced Laser Technologies "ALT 2007" Levi, Finland, 3 – 7 September 2007 (oral presentation)

  44. Silvia Neamtu, Radu Bratfalean, Ioan Turcu, Ioana Baldea - Fibroblasts aggregation monitoring by small angle light scattering measurement

    Procese Izotopice si Moleculare "PIM 2007", Cluj-Napoca, Romania, Septembrie 20-22 2007 (poster presentation)

  45. Radu Bratfalean, Silvia Neamtu, Ioan Turcu - Small angle scattering versus transmission for optical monitoring of aggregation processes

    Procese Izotopice si Moleculare "PIM 2007", Cluj-Napoca, Romania, Septembrie 20-22 2007 (poster presentation)

  46. D. Petcu, A. Eckstein, C. Giurgiu - Using Statefull Web Services to Expose the Functionality of Legacy Software Codes

    9th International Symposium on Automatic Control and Computer Science (SACCS), Iasi, Romania, November 14-16 2007

  47. D. Petcu - Trends in Grid Computing

    9th International Symposium on Automatic Control and Computer Science (SACCS), Iasi, Romania, November 14-16 2007 (invited talk)

  48. St. Maruster, C. Popirlan - Strong convergence of the projection method in convex feasibility problem

    International Symposium on Symbolic and Numeric Algorithms for Scientific Computing SYNASC 2007Timisoara, September 26-29 2007

  49. A. Craciun, M. Hodorog - The Quotient–Remainder Theorem for Natural Numbers: Discovery by Lazy Thinking

    First Central and Eastern European Conference on Computer Algebra and Dynamic Geometry Systems in Mathematics Education, CADGME 2007 20-23 June 2007, Pecs, Hungary

  50. D. Zaharie, S. Panica, M. Stoia-Djeska, M. Dragan, D. Petcu - Airfoil shape optimization by coupling computational fluid dynamics with evolutionary multiobjective optimization

    International Multiconference on Computer Science and Information Technology, IMCSIT 2007, Wisla, Poland, October 15 – 17, 2007

  51. Adrian Neagu, Octavian Doaga, Monica Neagu, Tudor Savopol, Eugenia Kovács - Cell seeding of tissue engineering scaffolds: experimental, kinetic and computer simulation study

    6th EBSA European Biophysics Congress, London, UK, July 14-18, 2007

  52. Octavian Doaga, Tudor Savopol, Adrian Neagu, Eugenia Kovács - Cell seeding process monitored by the turbidimetric method: the kinetics of cell adhesion on solid scaffolds

    Tissue Engineering and Regenerative Medicine International Society (TERMIS) European Chapter Meeting, London, UK, September 4-7, 2007

  53. Artur Cristea - Equations of state in a finite difference lattice Boltzmann model

    Fourth International Conference for Mesoscopic Methods in Engineering and Science 2007 (ICMMES 2007) Munich, Germany, July 16-20, 2007

  54. Carmen Stelian - Numerical Modelling of the semiconductor alloys solidification by using a baffle under microgravity and terrestrial conditions

    15th International Conference on Crystal Growth, Salt Lake City, USA, 12-17 August 2007 (oral presentation)

  55. Carmen Stelian, Daniel Vizman - Critical growth rate in Bridgman solidification of semi-transparent fluoride

    15th International Conference on Crystal Growth, Salt Lake City, USA, 12-17 August 2007 (poster presentation)

  56. Carmen Stelian - Oscillations of the longitudinal solutal profile in Bridgman growth of doped crystals

    15th International Conference on Crystal Growth, Salt Lake City, USA, 12-17 August 2007 (oral presentation)

  57. V. Sofonea - Lattice Boltzmann si aplicatii

    Workshop NANOSIM: Fizica computationala si modelarea fenomenelor complexe
    (NANOSIM Workshop: Computational physics and modeling of complex phenomena)    , May 29-30, 2008, Timisoara, Romania (oral presentation)

  58. O. Doaga - Modelarea proceselor de adeziune celulara pe biomatrici solide

    Workshop NANOSIM: Fizica computationala si modelarea fenomenelor complexe
    (NANOSIM Workshop: Computational physics and modeling of complex phenomena)    , May 29-30, 2008, Timisoara, Romania (oral presentation)

  59. A. Neagu - Studii in silico a sistemelor multicelulare

    Workshop NANOSIM: Fizica computationala si modelarea fenomenelor complexe
    (NANOSIM Workshop: Computational physics and modeling of complex phenomena)    , May 29-30, 2008, Timisoara, Romania (oral presentation)

  60. D. Vizman - 3D modelling of melt convection in industrial Czochralski-like configurations

    Workshop NANOSIM: Fizica computationala si modelarea fenomenelor complexe
    (NANOSIM Workshop: Computational physics and modeling of complex phenomena)    , May 29-30, 2008, Timisoara, Romania (oral presentation)

  61. D. Petcu, S. Panica - Porting legacy software codes towards Grid architectures

    Workshop NANOSIM: Fizica computationala si modelarea fenomenelor complexe
    (NANOSIM Workshop: Computational physics and modeling of complex phenomena)    , May 29-30, 2008, Timisoara, Romania (oral presentation)

  62. Ioan Turcu, Mikhail Kirillin - Caracterizarea distributiei unghiulare a fotonilor imprastiati quasi-balistic pe microparticule – Modele analitice si simulari Monte Carlo

    Workshop NANOSIM: Fizica computationala si modelarea fenomenelor complexe
    (NANOSIM Workshop: Computational physics and modeling of complex phenomena)    , May 29-30, 2008, Timisoara, Romania (oral presentation)

  63. Radu Bratfalean, Silvia Neamtu, Ioan Turcu - Imprastierea quasi-balistica a luminii in medii disperse- modelare si validare experimentala pe suspensii de sfere de latex

    Workshop NANOSIM: Fizica computationala si modelarea fenomenelor complexe
    (NANOSIM Workshop: Computational physics and modeling of complex phenomena)    , May 29-30, 2008, Timisoara, Romania (oral presentation)

  64. T. A. Beu - Infrared Spectra of Small Water Clusters

    Workshop NANOSIM: Fizica computationala si modelarea fenomenelor complexe
    (NANOSIM Workshop: Computational physics and modeling of complex phenomena)    , May 29-30, 2008, Timisoara, Romania (oral presentation)

  65. D. Petcu, A. Eckstein, C. Giurgiu - Reengineering a software system implementing parallel methods for differential equations

    7th Int. Conf. on Software Engineering, Parallel and Distributed Systems, SEPADS'08, University of Cambridge, UK, February 20-22, 2008

  66. M. Frincu, D. Petcu - On Designing an Asynchronous and Dynamic Platform for Solving Single Task Requests of Remote Applications

    The Third International Multi-Conference on Computing in the Global Information Technology, ICCGI 2008, Athens, Greece, 27 July - 1 August 2008

  67. D. Zaharie, M. Dragan, S. Panica, D. Petcu, M. Stoia-Djeska - Asynchronous master slave parallelization of evolutionary optimization in airfoil shape design

    9th International Workshop on State-of-the-Art in Scientific and Parallel Computing, PARA 2008, Trondheim, Norway, May 13-16, 2008

  68. T. A. Beu, G. Cabau - Infrared Spectra of Small Water Clusters: Relevance of Induced Polarization

    CEPAS- 4th Conference on Elementary Processes in Atomic Systems, Cluj-Napoca, Romania, June 18-20, 2008

  69. Adrian Neagu, Elijah Flenner, Francoise Marga, Bogdan Barz, Ioan Kosztin, Gabor Forgacs - Time evolution of multicellular structures studied by the Kinetic Monte Carlo method

    52nd Annual Meeting of the Biophysical Society and 16th IUPAB International Biophysics Congress, Long Beach, California, USA, 2-6 February, 2008

Education
  1. Octavian Doaga - PhD thesis

    Dinamica proceselor de adeziune celulara implicate în morfogeneza tisulara (in Romanian); Coordinator: Prof. Univ. dr. Eugenia Kovács, University of Medicine and Pharmacy "Carol Davila" Bucharest